Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3171
phage	P. putida Sci Big MOI 0.1	-0.7
nitrogen source	Ammonium chloride (N)	-0.7
carbon source	ferulate (C); with MOPS	-0.7
pH	Growth at pH7 and (C) Trisodium citrate	-0.7
no stress control	Growth with no stress	-0.6
carbon source	Valerolactone (C)	-0.6
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
phage	PUT8 MOI 0.1	-0.5
carbon source	Trisodium citrate (C)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.5
stress	1-Pentanol 0.3 vol%	-0.5
carbon source	Valerolactone (C)	-0.5
stress	Growth with Chloride 200 mM; with MOPS	-0.5
temperature	Growth at 25C	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
temperature	Growth at 34C	-0.5
temperature	Growth at 25C; with MOPS	-0.5
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM	+0.4
nitrogen source	Hippuric (N)	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
stress	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL	+0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
		remove PP_3171