Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3162
carbon source benzoic (C) -4.0
carbon source benzoic (C) -2.7
pH Valerolactone (C) pH 6.5 -1.3
phage P. putida Sci Big MOI 0.1 -1.2
carbon source benzoic (C) -1.0
carbon source Myristic (C) -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9
phage P. putida PUT 7 MOI 1 -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
nitrogen source nitrogen source nitrite 1mM -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.7
pH pH 6 -0.7
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.7
carbon source Ferulic Acid (C) -0.7
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7
carbon source D-Lysine 10 mM (C) -0.7
nitrogen source NAG (N) -0.7
phage P. put South MOI 10 -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
pH pH 5 -0.6
biofilm pdms biofilm PDMS; 24 hours -0.6
stress NaCl stress 250 mM -0.6
carbon source L-Leucine (C) -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6
pH Growth at pH9 and (C) D-Glucose +0.7
phage P. putida Sci small MOI 0.1 +0.8
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
phage P. putida Missley MOI 0.1 +0.9
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PP_3162