Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3161
carbon source benzoic (C) -2.9
carbon source benzoic (C) -2.8
carbon source benzoic (C) -0.7
nitrogen source Hippuric (N) -0.6
temperature shift Temperature shift 30_to_34; with MOPS -0.5
nitrogen source D-2-Aminobutyric (N) -0.5
carbon source acetate (C) -0.4
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4
nitrogen source Hippuric (N) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
nitrogen source no extra (N); with MOPS -0.3
nitrogen source Ammonium chloride (N) -0.3
phage P. putida Missley MOI 0.1 -0.3
temperature shift Temperature shift 10_to_30; with MOPS -0.3
nitrogen source nitrate (N) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3
carbon source Valeric (C) -0.3
nitrogen source NAG (N); with MOPS -0.3
temperature Growth at 30C; with MOPS -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.3
carbon source ferulate (C); with MOPS -0.3
temperature Growth at 25C -0.3
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3
phage P. putida Sci small MOI 0.1 +0.3
phage P. putida Sci Big MOI 0.1 +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
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PP_3161