Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3154
carbon source	2,3-Butanediol (C)	-1.8
carbon source	Decanoic (C)	-1.2
nitrogen source	Ammonium chloride and TNT (N)	-0.9
nitrogen source	Ammonium chloride and TNT (N)	-0.8
nitrogen source	Ammonium chloride and TNT (N)	-0.8
carbon source	Delta-Nonalactone (C)	-0.7
nitrogen source	Ammonium chloride and TNT (N)	-0.6
stress	Formaldehyde 0.03125 vol%	-0.6
carbon source	Delta-Decalactone (C)	-0.5
carbon source	Nonanoic (C)	-0.5
phage	P. putida PUT 7 MOI 1	-0.5
carbon source	ferulate (C); with MOPS	-0.5
carbon source	D-Glucose (C) 10 mM	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
carbon source	Valeric (C)	-0.4
phage	P. put South MOI 1	-0.4
carbon source	D-Glucose (C)	-0.4
carbon source	carbon source Bisabolol 45 mM	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.4
carbon source	Delta-Decalactone (C)	-0.4
carbon source	Heptanoic (C)	-0.3
carbon source	Vanillin (C)	-0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.4
carbon source	ferulate (C); with MOPS	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
pH	Growth at pH8 and (C) Trisodium citrate	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
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