Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3129
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
carbon source D-Glucose (C); with MOPS -0.6
nitrogen source nitrogen source nitrate 20mM -0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5
carbon source acetate (C) -0.5
carbon source L-Lysine 10 mM (C) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.4
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
nitrogen source nitrogen source nitrite 0.5mM -0.4
nitrogen source DL-2-Aminobutyric (N) +0.4
carbon source benzoic (C) +0.4
phage PUT8 MOI 0.1 +0.4
phage P. putida Sci Big MOI 0.1 +0.4
carbon source Tween 20 (C) +0.4
carbon source Rhamnogalacturonan - from potato (C) +0.4
carbon source D-Lysine 10 mM (C) +0.4
pH Growth at pH8 and (C) D-Glucose +0.4
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
carbon source Delta-Decalactone (C) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5
carbon source Rhamnogalacturonan - from potato (C) +0.6
nitrogen source D-2-Aminobutyric (N) +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
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PP_3129