Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_3096
phage	P. putida Missley MOI 0.1	-1.5
phage	P. putida Sci small MOI 0.1	-1.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.0
phage	P. putida PUT 7 MOI 1	-0.6
temperature shift	Temperature shift 30_to_21; with MOPS	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
nitrogen source	nitrogen source nitrite 1mM	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
nitrogen source	nitrate (N)	-0.5
temperature shift	Temperature shift 30_to_25; with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.4
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.4
carbon source	Tween 20 (C)	-0.4
carbon source	Myristic (C)	-0.4
nitrogen source	Urea (N)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
carbon source	4-Methyl-2-oxopentanoic (C)	+0.4
carbon source	Hexanoic (C)	+0.4
pH	Growth at pH7 and (C) D-Glucose	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
stress	R2A with Fusaric 240 ug/mL	+0.4
temperature shift	Temperature shift 30_to_4; with MOPS	+0.5
stress	3-methyl-1-butanol 0.4 vol%	+0.5
carbon source	D-Fructose (C)	+0.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.5
stress	1-Pentanol 0.3 vol%	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
		remove PP_3096