Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3091
pH	Growth at pH7 and (C) D-Glucose	-0.7
phage	P. putida Missley MOI 0.1	-0.5
phage	P. putida Sci Big MOI 0.1	-0.4
pH	Growth at pH8 and (C) D-Glucose	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.4
carbon source	D-Lysine 10 mM (C)	-0.4
carbon source	ferulate (C); with MOPS	-0.4
stress	Growth with Chloride 200 mM; with MOPS	-0.3
carbon source	Valeric (C)	-0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
temperature shift	Temperature shift 30_to_10; with MOPS	+0.3
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.3
nitrogen source	Ammonium chloride (N)	+0.3
temperature shift	Temperature shift 10_to_25; with MOPS	+0.3
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.3
r2a control	R2A control	+0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	+0.3
temperature shift	Temperature shift 10_to_30; with MOPS	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
pH	pH 6	+0.4
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.4
pH	pH 4	+0.4
nitrogen source	Ammonium chloride (N)	+0.4
carbon source	Delta-Dodecalactone (C)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
stress	Butanol 0.6 vol%	+0.5
stress	3-methyl-1-butanol 0.4 vol%	+0.5
stress	1-Pentanol 0.3 vol%	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
		remove PP_3091