Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_3019
pH	Growth at pH6 and (C) D-Glucose	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.1
carbon source	ferulate (C); with MOPS	-1.0
temperature shift	Temperature shift 30_to_21; with MOPS	-0.9
nitrogen source	Urea (N)	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.9
pH	Growth at pH9 and (C) Trisodium citrate	-0.8
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-0.8
pH	Growth at pH7 and (C) D-Glucose	-0.8
carbon source	D-Lysine 10 mM (C)	-0.7
nitrogen source	nitrate (N)	-0.7
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	-0.6
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.6
stress	R2A with Fusaric 240 ug/mL	-0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-0.6
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.6
pH	pH 9	+0.7
phage	P. putida Missley MOI 0.1	+0.7
stress	Formaldehyde 0.03125 vol%	+0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.6
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