Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_3002
nitrogen source Urea (N) -1.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4
carbon source carbon source 4-vinylphenol 0.1 mM -1.4
nitrogen source nitrogen source nitrite 0.5mM -1.4
carbon source carbon source 3-O-methyl-glucose 10 mM -1.3
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2
carbon source Valerolactone (C) -1.1
carbon source Acetate Carbon Source (5mM) -1.1
nitrogen source Urea (N) -1.1
temperature Growth at 30C; with MOPS -1.1
nitrogen source no extra (N) -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.1
carbon source Glutaric (C) -1.0
temperature shift Temperature shift 30_to_21; with MOPS -1.0
stress 3-methyl-3-butenol (pure) 0.25 vol% -1.0
pH Growth at pH9 and (C) D-Glucose -1.0
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9
nitrogen source NAG (N) -0.9
stress Growth with Chloride 500 mM; with MOPS -0.9
nitrogen source D-2-Aminobutyric (N) -0.9
carbon source ferulate (C); with MOPS +1.0
phage P. putida Sci small MOI 0.1 +1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +1.0
phage PUT 8 MOI 1 +1.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2
phage P. putida South MOI 10 +1.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +2.1
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PP_3002