Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_3001
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
carbon source	ferulate (C); with MOPS	-0.7
temperature shift	Temperature shift 30_to_21; with MOPS	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.6
temperature	Growth at 34C	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
temperature	Growth at 25C; with MOPS	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
nitrogen source	L-Valine (N)	-0.5
nitrogen source	Propiolactam (N)	-0.4
carbon source	3-Hydroxyhexanoic (C)	-0.4
temperature shift	Temperature shift 30_to_25; with MOPS	-0.4
stress	Growth with Chloride 500 mM; with MOPS	-0.4
carbon source	acetate (C)	-0.4
carbon source	D-Glucose (C)	-0.4
carbon source	D-Lysine 10 mM (C)	+0.4
pH	pH 6	+0.4
carbon source	L-Lysine (C)	+0.4
carbon source	carbon source 3-O-methyl-glucose 10 mM	+0.4
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.5
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+0.5
pH	pH 9	+0.5
nitrogen source	Urea (N)	+0.5
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+0.5
phage	P. putida Missley MOI 0.1	+0.5
pH	pH 8	+0.6
phage	P. putida Sci small MOI 0.1	+0.6
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