Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_2972
phage	PUT 8 MOI 1	-6.8
pH	Growth at pH7 and (C) D-Glucose	-6.6
pH	Growth at pH7 and (C) Trisodium citrate	-3.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-2.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.8
phage	P. putida PUT10 MOI 1	-1.6
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-1.6
carbon source	1,3-Butandiol (C)	-1.6
pH	Growth at pH7 and (C) D-Glucose	-1.5
nitrogen source	no extra (N); with MOPS	-1.4
temperature shift	Temperature shift 30_to_34; with MOPS	-1.4
temperature shift	Temperature shift 30_to_25; with MOPS	-1.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-1.4
carbon source	ferulate (C); with MOPS	-1.3
carbon source	BC Lignin Sorghum 10 vol% (C)	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.3
pH	Growth at pH6 and (C) Trisodium citrate	-1.2
phage	P. putida Sci small MOI 0.1	+1.2
carbon source	ferulate (C); with MOPS	+1.2
phage	P. putida PUT 7 MOI 1	+1.2
carbon source	Octanoic (C)	+1.2
temperature shift	Temperature shift 30_to_21; with MOPS	+1.3
pH	pH 6	+1.4
carbon source	carbon source 3-O-methyl-glucose 50 mM	+1.4
temperature shift	Temperature shift 30_to_25; with MOPS	+1.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+1.4
carbon source	carbon source D-Glucose 55.5 mM	+1.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+2.5
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