Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2962
nitrogen source	D-2-Aminobutyric (N)	-0.7
carbon source	Trisodium citrate (C)	-0.5
pH	pH 8	-0.4
carbon source	carbon source Bisabolol 45 mM	-0.4
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.4
stress	Growth with Chloride 200 mM	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.3
carbon source	carbon source Bisabolene 48.9 mM	-0.3
carbon source	Vanillin (C)	-0.3
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.3
stress	Growth with Chloride 200 mM; with MOPS	-0.3
temperature shift	Temperature shift 10_to_34; with MOPS	-0.3
pH	pH 5	-0.3
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.3
pH	pH 9	-0.3
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.3
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-0.3
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.3
micoeukaryotes	C.elegans, mixed culture-2	-0.3
temperature	Growth at 10C	+0.3
phage	P. putida Sci Big MOI 0.1	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
phage	P. putida Missley MOI 0.1	+0.3
temperature shift	Temperature shift 30_to_25	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
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