Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2961
phage P. putida Sci small MOI 0.1 -1.2
temperature shift Temperature shift 10_to_25; with MOPS -0.7
carbon source Valeric (C) -0.5
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
carbon source Crotonic (C) -0.4
stress R2A with Fusaric 480 ug/mL -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4
temperature shift Temperature shift 30_to_4 -0.4
stress Growth with Chloride 500 mM; with MOPS +0.4
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL +0.4
carbon source 3-Hydroxypropionate (C) +0.4
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.4
stress R2A with Fusaric 120 ug/mL +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4
pH Growth at pH6 and (C) D-Glucose +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4
phage moi 100 Time6-phageFRS +0.4
nitrogen source 2,6-diaminopimelic (N) +0.4
carbon source L-Lysine (C) +0.4
temperature shift Temperature shift 10_to_34; with MOPS +0.5
pH pH 4 +0.5
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5
nitrogen source Ammonium chloride (N); with MOPS +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
phage P. putida Sci small MOI 0.1 +0.6
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6
temperature shift Temperature shift 30_to_21; with MOPS +0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
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PP_2961