Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2936
nitrogen source NAG (N); with MOPS -0.6
nitrogen source D-2-Aminobutyric (N) -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.6
nitrogen source nitrogen source Ammonium chloride 20mM -0.6
carbon source Nonanoic (C) -0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5
carbon source Myristic (C) -0.4
carbon source Ethanol (C) -0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4
nitrogen source Caprolactam (N) -0.4
nitrogen source spermidine (N) -0.4
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.4
carbon source D-Lysine 10 mM (C) -0.4
pH D-Glucose (C) pH 6 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4
carbon source Ferulic Acid (C) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.4
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.4
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5
pH pH 7 +0.5
nitrogen source nitrite (N) +0.5
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5
phage P. putida Sci Big MOI 0.1 +0.5
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PP_2936