Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2933
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.8
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
carbon source Oleic (C) +0.5
carbon source 4-Methyl-2-oxopentanoic (C) +0.5
pH pH 9 +0.5
carbon source 4-Methyl-2-oxopentanoic (C) +0.5
temperature shift Temperature shift 30_to_25; with MOPS +0.5
carbon source carbon source 4-vinylphenol 0.1 mM +0.5
pH pH 7 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6
carbon source carbon source Bisabolol 45 mM +0.6
phage P. putida Missley MOI 0.1 +0.6
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.6
carbon source carbon source Glycerol 108.6 mM +0.6
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.6
carbon source carbon source D-Glucose 55.5 mM +0.6
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.6
carbon source carbon source Bisabolene 48.9 mM +0.7
phage P. putida Sci small MOI 0.1 +0.7
carbon source carbon source 3-O-methyl-glucose 50 mM +0.7
pH pH 5 +0.7
pH pH 4 +0.7
carbon source carbon source 4-vinylphenol 0.01 mM +0.8
pH pH 8 +0.9
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PP_2933