Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2932
nitrogen source	Propandiamine (N)	-6.1
nitrogen source	Propandiamine (N)	-5.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.1
carbon source	Decanoic (C)	-2.1
pH	Growth at pH7 and (C) D-Glucose	-1.9
nitrogen source	L-Arginine (N)	-1.9
nitrogen source	L-Arginine (N)	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.6
carbon source	1-Pentanol (C)	-1.5
stress	Growth with Chloride 500 mM	-1.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-1.4
supernatant	LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter	-1.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-1.3
stress	Growth with Chloride 500 mM; with MOPS	-1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.2
nitrogen source	Beta-alanine (N)	-1.1
stress	R2A with Fusaric 480 ug/mL	-1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.1
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
stress	R2A with Fusaric 120 ug/mL	-1.0
carbon source	Delta-Nonalactone (C)	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.0
nitrogen source	DL-2-Aminobutyric (N)	+1.1
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