Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2923
carbon source	D-Glucose (C)	-1.7
carbon source	1,3-Butandiol (C)	-1.5
carbon source	ferulate (C); with MOPS	-1.4
stress	R2A with Fusaric 240 ug/mL	-1.3
phage	P. putida South MOI 10	-1.1
stress	Growth with Chloride 500 mM; with MOPS	-1.0
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
r2a control	R2A control	-0.8
nitrogen source	NAG (N); with MOPS	-0.8
pH	Growth at pH7 and (C) D-Glucose	-0.8
carbon source	L-tyrosine 5 mM (C)	-0.7
pH	Growth at pH7 and (C) D-Glucose	-0.7
carbon source	pyruvate (C)	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
nitrogen source	Hydantoin (N)	+0.7
temperature shift	Temperature shift 30_to_25	+0.7
carbon source	Myristic (C)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7
carbon source	4-Hydroxyvalerate (C) (40mM)	+0.7
pH	pH 4	+0.8
carbon source	Vanillic Acid (C)	+0.8
carbon source	carbon source Bisabolene 48.9 mM	+0.8
stress	Growth with Chloride 500 mM; with MOPS	+0.8
carbon source	ferulate (C); with MOPS	+1.1
nitrogen source	Propiolactam (N)	+1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1
pH	pH 8	+1.2
phage	P. putida Sci small MOI 0.1	+1.6
		remove PP_2923