Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2914
nitrogen source	2,6-diaminopimelic (N)	-0.5
temperature shift	Temperature shift 30_to_25	-0.4
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.4
carbon source	Delta-Decalactone (C)	-0.4
pH	Growth at pH7 and (C) Trisodium citrate	-0.4
stress	R2A with Fusaric 240 ug/mL	-0.4
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.4
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.4
pH	pH 8	-0.4
carbon source	carbon source D-Glucose 55.5 mM	-0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.3
time series	Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
nitrogen source	2,6-diaminopimelic (N)	-0.3
phage	P. put PUT 10 MOI 0.1	-0.3
nitrogen source	nitrogen source nitrite 0.5mM	-0.3
pH	pH 7	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
carbon source	pyruvate (C)	-0.3
carbon source	propionate (C)	-0.3
stress	R2A with Fusaric 480 ug/mL	-0.3
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-0.3
pH	Growth at pH6 and (C) D-Glucose	+0.3
phage	P. putida Sci small MOI 0.1	+0.3
carbon source	D-Lysine 10 mM (C)	+0.3
dilutelb	LB 0.1x with 55.5 mM D-Glucose	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
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