Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_2909
carbon source	Glutaric (C)	-5.2
carbon source	Glutaric (C)	-5.0
carbon source	Valerolactam 10 mM (C)	-3.4
carbon source	5-Aminovaleric 10 mM (C)	-2.2
carbon source	5-Aminovaleric 10 mM (C)	-2.2
carbon source	Valerolactam (C)	-2.0
nitrogen source	5-Aminovaleric (N)	-1.4
nitrogen source	5-Aminovaleric (N)	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.0
carbon source	1,5-Pentanediol (C)	-0.8
phage	P. putida Missley MOI 0.1	-0.7
nitrogen source	NAG (N); with MOPS	-0.7
phage	PUT8 MOI 0.1	-0.7
nitrogen source	NAG (N)	-0.6
carbon source	L-Phenylalanine 5 mM (C)	-0.6
nitrogen source	Urea (N)	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
carbon source	ferulate (C); with MOPS	-0.5
carbon source	3-Hydroxydecanoic (C)	-0.5
carbon source	3-methyl-1-butanol 0.1 vol% (C)	+0.5
carbon source	Valeric (C)	+0.5
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.5
temperature	Growth at 30C; with MOPS	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	Valerolactone (C)	+0.6
carbon source	Valerolactone (C)	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.9
		remove PP_2909