Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2901
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.4
pH	pH 9	-0.4
nitrogen source	2,6-diaminopimelic (N)	-0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.3
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.3
carbon source	L-Leucine (C)	+0.3
nitrogen source	Urea (N)	+0.3
nitrogen source	no extra (N)	+0.3
temperature shift	Temperature shift 10_to_30; with MOPS	+0.3
carbon source	Valerolactone (C)	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
pH	Growth at pH8 and (C) D-Glucose	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.3
nitrogen source	nitrite (N)	+0.3
temperature shift	Temperature shift 10_to_25	+0.3
temperature shift	Temperature shift 10_to_30	+0.3
temperature shift	Temperature shift 10_to_30	+0.3
nitrogen source	NAG (N)	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.3
temperature shift	Temperature shift 10_to_25	+0.3
nitrogen source	D-2-Aminobutyric (N)	+0.3
pH	Growth at pH6 and (C) D-Glucose	+0.3
temperature shift	Temperature shift 30_to_25	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+0.4
nitrogen source	NAG (N); with MOPS	+0.4
pH	Growth at pH7 and (C) Trisodium citrate	+0.4
temperature shift	Temperature shift 10_to_30; with MOPS	+0.4
carbon source	Heptanoic (C)	+0.5
phage	P. putida Sci Big MOI 0.1	+0.5
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