Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2895
phage	P. putida Sci Big MOI 0.1	-1.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.8
nitrogen source	Ammonium chloride (N)	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.8
carbon source	acetate (C)	-0.7
nitrogen source	NAG (N); with MOPS	-0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.7
carbon source	3-Hydroxyhexanoic (C)	-0.6
temperature shift	Temperature shift 10_to_25; with MOPS	-0.6
nitrogen source	Propiolactam (N)	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
pH	Growth at pH9 and (C) Trisodium citrate	-0.6
carbon source	ferulate (C); with MOPS	-0.6
pH	pH 9	-0.6
no stress control	Growth with no stress	-0.5
phage	P. put South MOI 10	-0.5
pH	Growth at pH6 and (C) D-Glucose	+0.5
phage	PUT8 MOI 10	+0.5
stress	R2A with Fusaric 480 ug/mL	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.5
carbon source	Vanillin (C)	+0.6
carbon source	1,3-Butandiol (C)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.6
carbon source	Myristic (C)	+0.7
phage	P. putida Sci small MOI 0.1	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
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