Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2853
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.6
phage P. putida Sci small MOI 0.1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
nitrogen source no extra (N); with MOPS -0.5
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4
stress Butyrolactam 2 vol% -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.3
temperature shift Temperature shift 10_to_25; with MOPS -0.3
carbon source Trisodium citrate (C) -0.3
nitrogen source no extra (N); with MOPS -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3
carbon source L-Lysine 10 mM (C) +0.3
carbon source Sebacic (C) +0.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.3
phage P. put South MOI 0.1 +0.3
carbon source L-Leucine (C) +0.3
carbon source 4-Hydroxyvalerate (C) (40mM) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3
phage P. putida PUT10 MOI 1 +0.4
carbon source Succinic Acid (C) +0.4
carbon source L-Leucine (C) +0.4
carbon source ferulate (C); with MOPS +0.4
nitrogen source 2,6-diaminopimelic (N) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5
carbon source Succinic Acid (C) +0.5
nitrogen source 2,6-diaminopimelic (N) +0.5
carbon source L-Leucine (C) +0.5
carbon source a-Ketoglutaric (C) +0.6
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PP_2853