Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2845
pH	Growth at pH6 and (C) Trisodium citrate	-1.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.4
carbon source	Trisodium citrate (C)	-1.1
phage	P. putida Sci small MOI 0.1	-1.0
carbon source	ferulate (C); with MOPS	-0.9
pH	Growth at pH8 and (C) D-Glucose	-0.9
stress	R2A with Fusaric 240 ug/mL	-0.9
carbon source	5-Hydroxydodecanoate (C)	-0.8
nitrogen source	Urea (N)	-0.8
carbon source	Valeric (C)	-0.8
carbon source	D-Glucose (C); with MOPS	-0.7
nitrogen source	Adenine (N)	-0.7
nitrogen source	Adenine (N)	-0.7
temperature shift	Temperature shift 10_to_30; with MOPS	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
nitrogen source	4-Guanidinobutyric (N)	-0.7
stress	Growth with Chloride 200 mM	-0.7
nitrogen source	nitrite (N)	-0.7
temperature shift	Temperature shift 30_to_25; with MOPS	-0.7
temperature	Growth at 34C	+0.7
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7
phage	P. putida PUT10 MOI 0.1	+0.7
carbon source	Hexanoic (C)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
nophagecontrol	TIme6-nophage	+0.7
nitrogen source	nitrogen source nitrate 5mM	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.8
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.8
carbon source	Hexanoic (C)	+0.8
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