Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2844
phage	P. putida Sci small MOI 0.1	-2.8
pH	Growth at pH7 and (C) Trisodium citrate	-2.5
carbon source	acetate (C)	-1.9
pH	Growth at pH8 and (C) D-Glucose	-1.6
stress	Growth with Chloride 500 mM	-1.3
carbon source	ferulate (C); with MOPS	-1.2
temperature shift	Temperature shift 10_to_25; with MOPS	-1.2
carbon source	Succinic Acid (C)	-1.0
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM	-1.0
temperature shift	Temperature shift 10_to_25; with MOPS	-1.0
carbon source	Ethyl decanoate (C)	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.0
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x	-0.9
nitrogen source	NAG (N); with MOPS	-0.9
carbon source	D-Glucose (C)	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9
stress	Growth with Chloride 500 mM; with MOPS	-0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8
nitrogen source	Ammonium chloride (N); with MOPS	-0.8
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
phage	P. putida Sci Big MOI 0.1	-0.8
pH	Growth at pH8 and (C) Trisodium citrate	-0.8
pH	Growth at pH6 and (C) D-Glucose	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
phage	P. put South MOI 0.1	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.8
no stress control	Growth with no stress	+0.8
carbon source	Valerolactone (C)	+0.9
carbon source	1,3-Butandiol (C)	+1.1
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