Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2835
pH	Growth at pH7 and (C) Trisodium citrate	-2.3
carbon source	ferulate (C); with MOPS	-2.1
phage	P. putida Sci small MOI 0.1	-2.0
carbon source	Crotonic (C)	-1.7
carbon source	acetate (C)	-1.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.3
phage	P. putida Sci Big MOI 0.1	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.2
temperature	Growth at 25C	-1.1
nitrogen source	NAG (N)	-1.1
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-1.1
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-1.0
carbon source	2-methyl-1-butanol (C)	-1.0
nitrogen source	Urea (N); with MOPS	-1.0
nitrogen source	nitrate (N)	-1.0
temperature	Growth at 30C; with MOPS	-1.0
pH	Growth at pH7 and (C) D-Glucose	-0.9
temperature shift	Temperature shift 30_to_10; with MOPS	-0.9
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	-0.9
temperature shift	Temperature shift 30_to_10	-0.9
temperature shift	Temperature shift 30_to_25	-0.9
stress	R2A with Fusaric 120 ug/mL	-0.9
phage	P. put PUT 10 MOI 1	+0.9
stress	3-methyl-3-butenol (pure) 0.25 vol%	+0.9
carbon source	Oleic (C)	+0.9
no stress control	Growth with no stress	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.1
		remove PP_2835