Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2820
carbon source 3-methyl-1-butanol 0.1 vol% (C) -5.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.7
nitrogen source D-2-Aminobutyric (N) -3.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.4
nitrogen source D-2-Aminobutyric (N) -3.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.1
carbon source Vanillin (C) -3.0
nitrogen source spermidine (N) -2.8
carbon source 3-methyl-1-butanol (C) -2.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.7
temperature shift Temperature shift 10_to_25; with MOPS -2.7
carbon source 1,3-Hexanediol (C) -2.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.7
carbon source Vanillin (C) -2.7
pH pH 6 -2.6
nitrogen source Hippuric (N) -2.4
pH Growth at pH7 and (C) D-Glucose -2.4
nitrogen source Hippuric (N) -2.4
carbon source 1,3-Hexanediol (C) -2.4
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -2.4
nitrogen source nitrite (N) -2.3
carbon source 3-methyl-1-butanol (C) -2.3
carbon source 1-Pentanol (C) -2.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.2
carbon source L-Lysine (C) -2.2
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -2.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.2
pH pH 7 -2.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.1
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PP_2820