Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2819
phage P. putida Sci small MOI 0.1 -1.6
phage P. putida Sci Big MOI 0.1 -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2
carbon source D-Glucose (C) -1.1
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0
temperature shift Temperature shift 30_to_21; with MOPS -0.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.9
nitrogen source nitrogen source nitrite 1mM -0.9
carbon source carbon source 3-O-methyl-glucose 10 mM -0.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.8
pH Growth at pH6 and (C) Trisodium citrate -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7
carbon source acetate (C) -0.7
carbon source Tween 20 (C) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.7
temperature shift Temperature shift 10_to_25; with MOPS -0.7
nitrogen source D-2-Aminobutyric (N) -0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
nitrogen source nitrate (N) -0.6
carbon source L-Leucine (C) -0.6
carbon source ferulate (C); with MOPS +0.6
pH D-Glucose (C) pH 7 +0.6
nitrogen source nitrogen source nitrate 5mM +0.7
nitrogen source Propiolactam (N) +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
nitrogen source nitrogen source nitrite 0.5mM +0.8
pH Valerolactone (C) pH 6.5 +0.9
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PP_2819