Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2801
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
carbon source	Valeric (C)	-0.6
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.6
phage	PUT 8 MOI 1	-0.6
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.5
stress	R2A with Fusaric 120 ug/mL	-0.5
carbon source	Myristic (C)	-0.5
carbon source	Lignin Monomers (C)	-0.5
stress	Growth with Chloride 200 mM	-0.5
carbon source	Lignin Monomers (C)	-0.5
stress	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL	-0.5
pH	D-Glucose (C) pH 6	-0.5
temperature shift	Temperature shift 30_to_21; with MOPS	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
lb	LB	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.5
pH	Growth at pH6 and (C) D-Glucose	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
pH	Growth at pH7 and (C) D-Glucose	+0.5
nitrogen source	Ammonium chloride (N)	+0.5
nitrogen source	nitrogen source nitrite 1mM	+0.6
phage	P. putida Sci small MOI 0.1	+0.6
stress	Growth with Chloride 500 mM; with MOPS	+0.6
phage	P. putida Sci Big MOI 0.1	+0.8
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