Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2798
phage	P. putida Sci Big MOI 0.1	-1.6
temperature shift	Temperature shift 30_to_25	-1.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.0
no stress control	Growth with no stress	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9
pH	Growth at pH6 and (C) D-Glucose	-0.9
carbon source	3-Hydroxydecanoic (C)	-0.9
pH	Growth at pH6 and (C) Trisodium citrate	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.9
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	-0.8
phage	PUT8 MOI 0.1	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	benzoic (C)	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7
phage	P. putida South MOI 10	-0.7
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7
phage	PUT 8 MOI 1	-0.7
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.7
carbon source	L-Phenylalanine 5 mM (C)	-0.7
carbon source	D-Lysine 10 mM (C)	-0.7
phage	P. putida PUT10 MOI 1	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
nitrogen source	nitrogen source Ammonium chloride 20mM	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.8
carbon source	Tween 20 (C)	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9
nitrogen source	nitrogen source nitrate 5mM	+0.9
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