Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_2789
temperature shift Temperature shift 30_to_21; with MOPS -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
phage PUT8 MOI 0.1 -0.5
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5
carbon source 1,3-Butandiol (C) -0.5
phage P. putida Missley MOI 0.1 -0.4
carbon source ferulate (C); with MOPS -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
carbon source Beta-alanine (C) -0.4
carbon source Protocatechuic Acid (C) -0.4
phage P. putida PUT10 MOI 10 -0.4
carbon source Valerolactam 10 mM (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
carbon source Phenylacetic (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
carbon source Delta-Dodecalactone (C) -0.4
carbon source carbon source 4-vinylphenol 0.1 mM +0.4
carbon source D-Glucose (C); with MOPS +0.4
nitrogen source NAG (N); with MOPS +0.4
carbon source Valerolactone (C) +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4
temperature shift Temperature shift 30_to_10 +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.4
nitrogen source nitrate (N) +0.4
stress Growth with Chloride 200 mM; with MOPS +0.4
carbon source D-Glucose (C) +0.4
no stress control Growth with no stress +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5
nitrogen source 2,6-diaminopimelic (N) +0.7
remove
PP_2789