Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_2784
pH	Growth at pH9 and (C) Trisodium citrate	-2.0
carbon source	carbon source 3-O-methyl-glucose 10 mM	-1.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.4
stress	R2A with Fusaric 480 ug/mL	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.2
phage	P. putida Sci small MOI 0.1	-1.2
carbon source	carbon source D-Glucose 55.5 mM	-1.2
temperature shift	Temperature shift 30_to_21; with MOPS	-1.1
temperature	Growth at 25C; with MOPS	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-1.1
phage	P. putida PUT 7 MOI 1	-1.0
temperature shift	Temperature shift 30_to_25	-1.0
temperature	Growth at 25C	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.0
carbon source	Sebacic (C)	-1.0
carbon source	Vanillin (C)	-1.0
stress	R2A with Fusaric 120 ug/mL	-0.9
carbon source	Tween 20 (C)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
nitrogen source	2,6-diaminopimelic (N)	-0.9
carbon source	3-Hydroxydecanoic (C)	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.9
pH	Growth at pH9 and (C) D-Glucose	-0.9
pH	Growth at pH7 and (C) Trisodium citrate	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.9
temperature	Growth at 30C; with MOPS	-0.9
pH	Valerolactone (C) pH 6.5	+1.0
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