Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_2781
carbon source D-Glucose (C) -0.9
phage P. putida Sci Big MOI 0.1 -0.9
carbon source Myristic (C) -0.7
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7
time series Timeseries; MAX condition; Bioreplicate 1; Time 5hrs; Measurement -0.6
carbon source carbon source Bisabolol 45 mM -0.6
carbon source carbon source Bisabolene 48.9 mM -0.5
micoeukaryotes C.elegans, mixed culture-2 -0.5
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5
stress Growth with Chloride 200 mM -0.4
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4
carbon source carbon source D-Glucose 55.5 mM -0.4
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -0.4
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
carbon source butyrate (C) +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
nitrogen source D-2-Aminobutyric (N) +0.5
nitrogen source nitrogen source nitrite 0.5mM +0.5
r2a control R2A control +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7
remove
PP_2781