Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2778
pH	Growth at pH9 and (C) Trisodium citrate	-0.9
nitrogen source	2,6-diaminopimelic (N)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
temperature	Growth at 25C	-0.7
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.7
stress	Growth with Chloride 500 mM; with MOPS	-0.7
temperature shift	Temperature shift 30_to_25	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.6
carbon source	D-Glucose (C); with MOPS	-0.6
no stress control	Growth with no stress	-0.6
phage	PUT 8 MOI 1	-0.6
phage	PUT8 MOI 0.1	-0.6
temperature shift	Temperature shift 10_to_25; with MOPS	-0.6
temperature	Growth at 30C; with MOPS	-0.5
carbon source	Valeric (C)	-0.5
nitrogen source	Urea (N); with MOPS	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
pH	Growth at pH7 and (C) Trisodium citrate	-0.5
temperature shift	Temperature shift 10_to_21	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.5
temperature shift	Temperature shift 10_to_34	-0.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.5
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
phage	P. putida Sci Big MOI 0.1	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
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