Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2764
phage	P. putida Sci small MOI 0.1	-5.3
phage	P. putida PUT 7 MOI 1	-4.5
phage	PUT 8 MOI 1	-2.9
phage	P. putida Missley MOI 0.1	-1.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.7
phage	P. putida South MOI 10	-1.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.6
temperature shift	Temperature shift 30_to_34; with MOPS	-1.4
carbon source	L-Leucine (C)	-1.3
no stress control	Growth with no stress	-1.2
carbon source	D-Glucose (C)	-1.2
carbon source	Delta-Nonalactone (C)	-1.1
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-1.0
nitrogen source	TNT (N)	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.0
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-0.9
pH	Growth at pH9 and (C) Trisodium citrate	+1.0
carbon source	carbon source 4-vinylphenol 0.01 mM	+1.0
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+1.0
phage	PUT8 MOI 10	+1.0
carbon source	carbon source Bisabolol 45 mM	+1.0
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+1.0
carbon source	carbon source Glycerol 108.6 mM	+1.1
carbon source	butyrate (C)	+1.2
pH	pH 4	+1.3
pH	pH 8	+1.4
pH	pH 9	+1.5
carbon source	carbon source D-Glucose 55.5 mM	+1.6
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	+1.6
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