Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2759
nitrogen source	2,6-diaminopimelic (N)	-2.0
carbon source	Valerolactone (C)	-1.8
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-1.8
nitrogen source	D-2-Aminobutyric (N)	-1.5
carbon source	acetate (C)	-1.5
carbon source	ferulate (C); with MOPS	-1.5
nitrogen source	Propandiamine (N)	-1.4
temperature	Growth at 25C	-1.4
nitrogen source	Urea (N); with MOPS	-1.4
pH	Growth at pH7 and (C) Trisodium citrate	-1.3
phage	P. putida Missley MOI 0.1	-1.3
pH	Growth at pH8 and (C) D-Glucose	-1.1
carbon source	D-Glucose (C)	-1.1
nitrogen source	nitrogen source nitrite 1mM	-1.0
phage	P. putida Sci small MOI 0.1	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.9
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.9
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.8
phage	P. put South MOI 10	-0.8
no phage control	Time6-nophage	-0.8
pH	pH 8	+0.8
carbon source	Valerolactone (C)	+0.9
temperature shift	Temperature shift 30_to_25; with MOPS	+0.9
temperature shift	Temperature shift 30_to_21	+0.9
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	+0.9
pH	Growth at pH6 and (C) Trisodium citrate	+0.9
carbon source	3-Hydroxydecanoic (C)	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+1.5
		remove PP_2759