Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2723
nitrogen source	NAG (N); with MOPS	-1.9
nitrogen source	D-2-Aminobutyric (N)	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.1
carbon source	D-Lysine 10 mM (C)	-1.1
nitrogen source	nitrogen source nitrite 1mM	-1.1
phage	P. putida Missley MOI 0.1	-1.1
nitrogen source	nitrogen source nitrite 1mM	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.9
temperature shift	Temperature shift 10_to_25; with MOPS	-0.9
nitrogen source	Hippuric (N)	-0.9
carbon source	L-Alanine (C)	-0.8
phage	P. putida Sci small MOI 0.1	-0.8
carbon source	butyrate (C)	-0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
nitrogen source	NAG (N); with MOPS	-0.7
nitrogen source	nitrite (N)	+0.7
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	+0.7
pH	Growth at pH8 and (C) Trisodium citrate	+0.7
nitrogen source	nitrate (N)	+0.8
nitrogen source	Ammonium chloride (N); with MOPS	+0.8
pH	Growth at pH6 and (C) Trisodium citrate	+0.8
temperature shift	Temperature shift 30_to_21; with MOPS	+0.8
phage	P. putida PUT 7 MOI 1	+0.8
temperature shift	Temperature shift 30_to_25; with MOPS	+0.9
carbon source	ferulate (C); with MOPS	+1.2
carbon source	Trisodium citrate (C)	+1.2
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