Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2710
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-3.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.8
carbon source	Ferulic Acid (C)	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
pH	D-Glucose (C) pH 6	-0.7
stress	R2A with Fusaric 480 ug/mL	-0.7
stress	Growth with Chloride 200 mM; with MOPS	-0.7
carbon source	ferulate (C); with MOPS	-0.7
stress	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL	-0.7
stress	Growth with Chloride 500 mM; with MOPS	-0.7
carbon source	2-Methylbutanoic (C)	-0.6
stress	R2A with Fusaric 120 ug/mL	-0.6
pH	D-Glucose (C) pH 6	-0.6
phage	P. putida Sci Big MOI 0.1	-0.6
pH	D-Glucose (C) pH 6.5	-0.6
carbon source	ferulate (C); with MOPS	-0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.6
pH	Valerolactone (C) pH 6.5	-0.6
nitrogen source	nitrogen source Ammonium chloride 20mM	+0.5
nitrogen source	nitrogen source nitrite 1mM	+0.5
nitrogen source	Urea (N)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
pH	pH 7	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.7
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	+0.7
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