Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2693
phage P. putida Sci small MOI 0.1 -2.2
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.3
nitrogen source no extra (N); with MOPS -1.2
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.2
no stress control Growth with no stress -1.2
pH Growth at pH6 and (C) D-Glucose -1.0
no stress control Growth with no stress -1.0
nitrogen source nitrogen source Ammonium chloride 20mM -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0
nitrogen source 2,6-diaminopimelic (N) -0.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.9
carbon source carbon source D-Glucose 55.5 mM -0.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.9
carbon source Trisodium citrate (C) -0.9
carbon source D-Glucose (C) -0.8
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.8
temperature Growth at 34C -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7
stress 1-Pentanol 0.3 vol% -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.7
carbon source 3-Hydroxydecanoic (C) +0.7
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.7
carbon source Tween 20 (C) +0.8
carbon source ferulate (C); with MOPS +0.8
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
temperature shift Temperature shift 10_to_30 +0.8
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5
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PP_2693