Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2653
carbon source	D-Glucose (C)	-1.7
phage	P. putida PUT10 MOI 10	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
phage	P. putida PUT10 MOI 10	-1.1
pH	Growth at pH9 and (C) Trisodium citrate	-1.1
nitrogen source	Ammonium chloride (N)	-1.0
nitrogen source	nitrogen source nitrite 0.5mM	-1.0
phage	P. putida South MOI 0.1	-1.0
carbon source	Valerolactone (C)	-1.0
phage	P. putida South MOI 1	-1.0
carbon source	1,3-Butandiol (C)	-0.9
nitrogen source	Ammonium chloride (N)	-0.9
phage	P. putida South MOI 0.1	-0.9
carbon source	Acetate Carbon Source (5mM)	-0.9
carbon source	Delta-Nonalactone (C)	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
nitrogen source	Butyrolactam (N)	-0.8
carbon source	pyruvate (C)	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
temperature shift	Temperature shift 30_to_34; with MOPS	-0.8
temperature shift	Temperature shift 30_to_25; with MOPS	+0.8
carbon source	3-methyl-3-buten-1-ol 0.1 vol% (C)	+0.8
pH	Growth at pH7 and (C) D-Glucose	+0.8
phage	P. putida PUT 7 MOI 1	+0.8
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.8
temperature shift	Temperature shift 10_to_30	+0.9
phage	P. put South MOI 10	+0.9
nitrogen source	2,6-diaminopimelic (N)	+1.0
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	+1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+1.2
		remove PP_2653