Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2641
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
carbon source	ferulate (C); with MOPS	-0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5
phage	P. putida Sci small MOI 0.1	-0.4
nitrogen source	Ammonium chloride (N); with MOPS	-0.4
carbon source	Crotonic (C)	-0.4
nitrogen source	2,6-diaminopimelic (N)	-0.4
temperature shift	Temperature shift 10_to_25; with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
carbon source	carbon source Glycerol 108.6 mM	+0.4
nitrogen source	Ammonium chloride and TNT (N)	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.4
nitrogen source	Ammonium chloride and TNT (N)	+0.4
carbon source	carbon source Bisabolol 45 mM	+0.4
pH	pH 6	+0.4
carbon source	carbon source D-Glucose 55.5 mM	+0.4
nitrogen source	D-2-Aminobutyric (N)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
micoeukaryotes	C.elegans, mixed culture-2	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+0.6
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.6
micoeukaryotes	C.elegans, mixed culture-1	+0.6
nitrogen source	Propandiamine (N)	+0.9
nitrogen source	Propandiamine (N)	+1.1
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