Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2592
temperature shift Temperature shift 30_to_25; with MOPS -1.5
pH Valerolactone (C) pH 6.5 -1.5
stress Growth with Chloride 500 mM; with MOPS -1.4
carbon source Myristic (C) -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1
carbon source L-tyrosine 5 mM (C) -1.1
nitrogen source nitrite (N) -1.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -1.1
phage P. putida Missley MOI 0.1 -1.1
carbon source Acetate Carbon Source (5mM) -0.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.9
pH Growth at pH7 and (C) D-Glucose -0.9
carbon source ferulate (C); with MOPS -0.9
nitrogen source D-2-Aminobutyric (N) -0.9
time series Timeseries; NC condition; Bioreplicate 1; Time 5hrs; Measurement -0.8
carbon source Nonanoic (C) -0.8
pH Growth at pH9 and (C) Trisodium citrate -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.8
temperature shift Temperature shift 30_to_34; with MOPS -0.8
pH Growth at pH9 and (C) Trisodium citrate -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8
pH Valerolactone (C) pH 6.5 +0.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.0
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PP_2592