Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2589
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
pH	Growth at pH7 and (C) D-Glucose	-0.6
carbon source	ferulate (C); with MOPS	-0.5
pH	Growth at pH9 and (C) Trisodium citrate	-0.5
pH	Growth at pH6 and (C) Trisodium citrate	-0.5
carbon source	butyrate (C)	-0.5
nitrogen source	D-2-Aminobutyric (N)	-0.5
carbon source	Delta-Undecalactone (C)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.4
carbon source	D-Glucose (C)	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
carbon source	Acetate Carbon Source (20mM)	-0.4
temperature shift	Temperature shift 30_to_21; with MOPS	-0.4
carbon source	L-Glutamic (C)	-0.4
temperature shift	Temperature shift 10_to_30; with MOPS	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	+0.4
nitrogen source	nitrogen source nitrate 5mM	+0.4
carbon source	L-Lysine 10 mM (C)	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
phage	P. putida Sci small MOI 0.1	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
carbon source	carbon source Glycerol 108.6 mM	+0.5
pH	pH 5	+0.5
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.5
phage	P. putida Missley MOI 0.1	+0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.6
pH	pH 9	+0.7
		remove PP_2589