Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2563
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5
carbon source L-Glutamic (C) -0.4
phage P. putida Sci Big MOI 0.1 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.4
carbon source L-Alanine (C) -0.3
carbon source carbon source 3-O-methyl-glucose 50 mM -0.3
carbon source ferulate (C); with MOPS -0.3
stress R2A with Fusaric 240 ug/mL -0.3
carbon source ferulate (C); with MOPS -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3
carbon source carbon source Bisabolene 48.9 mM -0.3
stress Growth with Chloride 500 mM; with MOPS -0.3
pH pH 7 -0.3
carbon source carbon source 4-vinylphenol 0.1 mM -0.3
phage P. putida Sci small MOI 0.1 -0.3
carbon source carbon source 4-vinylphenol 0.01 mM -0.3
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.3
carbon source DL-2-Aminoadipic 10 mM (C) -0.3
nitrogen source no extra (N); with MOPS -0.2
carbon source BC Lignin Sorghum 10 vol% (C) +0.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.2
temperature Growth at 30C; with MOPS +0.2
carbon source Tween 20 (C) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
nitrogen source nitrogen source nitrate 20mM +0.3
temperature shift Temperature shift 30_to_25 +0.3
carbon source Tween 20 (C) +0.3
temperature shift Temperature shift 10_to_25 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3
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PP_2563