Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_2558
carbon source	carbon source D-Glucose 55.5 mM	-0.7
nitrogen source	nitrogen source nitrate 5mM	-0.7
pH	Growth at pH8 and (C) D-Glucose	-0.7
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.6
phage	PUT8 MOI 0.1	-0.6
nitrogen source	nitrogen source nitrite 0.5mM	-0.5
phage	P. putida Missley MOI 0.1	-0.5
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.4
pH	pH 7	-0.4
stress	Growth with Chloride 200 mM; with MOPS	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
nitrogen source	Propiolactam (N)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.4
carbon source	carbon source Glycerol 108.6 mM	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
nitrogen source	no extra (N); with MOPS	-0.4
phage	P. putida Sci Big MOI 0.1	-0.4
phage	P. putida South MOI 10	+0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.4
carbon source	Lignin Monomers (C)	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.4
phage	P. putida South MOI 10	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4
pH	Growth at pH7 and (C) D-Glucose	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
carbon source	ferulate (C); with MOPS	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
		remove PP_2558