Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_2540
carbon source	Tween 20 (C)	-2.1
carbon source	4-Methyl-2-oxopentanoic (C)	-1.5
nitrogen source	Urea (N)	-1.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.3
carbon source	rac-3-Hydroxypentanoic Acid (C)	-1.3
nitrogen source	2,6-diaminopimelic (N)	-1.2
carbon source	Heptanoic (C)	-1.2
temperature shift	Temperature shift 10_to_30	-1.1
carbon source	Delta-Dodecalactone (C)	-1.1
carbon source	Vanillin (C)	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1
nitrogen source	no extra (N); with MOPS	-1.1
anaerobic m9	anaerobic M9	-1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
nitrogen source	Ammonium chloride (N)	-1.0
carbon source	butyrate (C)	-1.0
carbon source	Lauric (C)	-0.9
no stress control	Growth with no stress	-0.9
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.9
stress	Growth with Chloride 500 mM; with MOPS	-0.9
nitrogen source	Propiolactam (N)	-0.9
temperature shift	Temperature shift 30_to_10; with MOPS	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9
nitrogen source	D-2-Aminobutyric (N)	+0.9
microaerobic m9	microaerobic M9	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
carbon source	5-Aminovaleric 10 mM (C)	+0.9
pH	Growth at pH9 and (C) Trisodium citrate	+0.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+1.0
phage	PUT 8 MOI 1	+1.3
		remove PP_2540