Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_2536
phage P. putida Sci small MOI 0.1 -1.1
phage P. putida Sci Big MOI 0.1 -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.0
carbon source 4-Aminobutyric 10 mM (C) -1.0
phage P. putida PUT 7 MOI 1 -0.9
phage P. putida Sci small MOI 0.1 -0.9
nitrogen source 2,6-diaminopimelic (N) -0.8
nitrogen source NAG (N) -0.8
carbon source L-Leucine (C) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7
pH Growth at pH6 and (C) Trisodium citrate -0.7
stress R2A with Fusaric 480 ug/mL -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6
carbon source 1,3-Butandiol (C) -0.6
carbon source Valeric (C) -0.6
carbon source Lignin Monomers (C) -0.6
carbon source acetate (C) -0.6
nitrogen source Ammonium chloride (N); with MOPS -0.6
temperature shift Temperature shift 10_to_25; with MOPS -0.5
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.5
carbon source ferulate (C); with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
nitrogen source nitrogen source Ammonium chloride 20mM +0.5
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9
nitrogen source nitrogen source nitrite 1mM +0.9
remove
PP_2536