Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2531
nitrogen source L-Leucine (N) -0.6
pH Growth at pH6 and (C) D-Glucose -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
phage P. putida PUT10 MOI 1 -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.4
temperature Growth at 25C; with MOPS -0.4
carbon source D-Glucuronic gamma lactone (C) -0.4
carbon source ferulate (C); with MOPS -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
nitrogen source no extra (N) -0.4
carbon source D-Glucose (C) -0.4
carbon source 1,3-Butandiol (C) -0.4
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -0.4
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.4
carbon source D-Glucose (C); with MOPS -0.4
carbon source D-Glucose (C) -0.4
carbon source butyrate (C) -0.4
carbon source carbon source D-Glucose 55.5 mM +0.4
carbon source 3-Hydroxydecanoic (C) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
nitrogen source D-2-Aminobutyric (N) +0.4
nitrogen source NAG (N); with MOPS +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
micoeukaryotes C.elegans, mixed culture-1 +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.7
phage P. putida PUT 7 MOI 1 +0.7
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PP_2531