Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2510
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-4.9
phage	PUT 8 MOI 1	-4.8
pH	Growth at pH7 and (C) D-Glucose	-4.7
pH	Growth at pH7 and (C) Trisodium citrate	-4.5
pH	Growth at pH6 and (C) Trisodium citrate	-4.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.5
carbon source	ferulate (C); with MOPS	-3.3
pH	Growth at pH8 and (C) D-Glucose	-3.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.9
temperature shift	Temperature shift 30_to_21; with MOPS	-2.8
pH	Valerolactone (C) pH 6.5	-2.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-2.4
carbon source	L-Leucine (C)	-2.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-2.2
carbon source	1,3-Butandiol (C)	-2.1
pH	pH 4	-2.0
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	-1.9
stress	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL	-1.9
stress	Growth with Chloride 200 mM; with MOPS	-1.8
nitrogen source	D-2-Aminobutyric (N)	-1.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.7
pH	Growth at pH7 and (C) Trisodium citrate	-1.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.6
pH	Growth at pH6 and (C) Trisodium citrate	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.6
carbon source	4-Methyl-2-oxopentanoic (C)	-1.5
stress	R2A with Fusaric 120 ug/mL	-1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.9
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