Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_2487
nitrogen source	TNT (N)	-0.5
nitrogen source	Ammonium chloride (N)	-0.4
nitrogen source	Urea (N); with MOPS	-0.4
nitrogen source	Ammonium chloride and TNT (N)	-0.4
nitrogen source	TNT (N)	-0.4
nitrogen source	TNT (N)	-0.4
nitrogen source	TNT (N)	-0.3
carbon source	Octanoic (C)	-0.3
carbon source	Tween 20 (C)	-0.3
temperature shift	Temperature shift 30_to_25; with MOPS	-0.3
pH	Growth at pH9 and (C) Trisodium citrate	-0.3
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.3
carbon source	ferulate (C); with MOPS	-0.3
temperature shift	Temperature shift 30_to_34; with MOPS	-0.3
nitrogen source	Ammonium chloride and TNT (N)	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
carbon source	Oleic (C)	-0.3
micoeukaryotes	Dictyostellum sp.mixed culture-1	-0.3
nitrogen source	Ammonium chloride and TNT (N)	-0.3
nitrogen source	Ammonium chloride (N)	-0.3
pH	Growth at pH6 and (C) D-Glucose	+0.3
microaerobic m9	microaerobic M9	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.5
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