Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_2486
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4
carbon source ferulate (C); with MOPS -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
pH Growth at pH7 and (C) D-Glucose -0.4
nitrogen source Ammonium chloride (N) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
stress R2A with Fusaric 480 ug/mL -0.4
carbon source benzoic (C) -0.3
pH Growth at pH9 and (C) D-Glucose -0.3
nitrogen source Ammonium chloride (N) -0.3
pH Growth at pH6 and (C) D-Glucose -0.3
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3
nitrogen source nitrate (N) -0.3
temperature shift Temperature shift 10_to_21; with MOPS -0.3
carbon source Tween 20 (C) -0.3
no stress control Growth with no stress -0.3
nitrogen source NAG (N); with MOPS -0.3
temperature shift Temperature shift 10_to_30; with MOPS -0.3
stress Growth with Chloride 500 mM; with MOPS -0.3
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3
phage P. put South MOI 10 +0.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.4
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PP_2486